Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 AC151836.1-201ENSMUST00000228730 1637 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm13592-201ENSMUST00000118148 1010 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm8302-201ENSMUST00000119217 852 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm12464-201ENSMUST00000121385 1016 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm37012-201ENSMUST00000194991 1078 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm26035-201ENSMUST00000083065 308 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm42589-201ENSMUST00000199097 1751 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm15528-201ENSMUST00000117821 864 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm8488-201ENSMUST00000176112 1280 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm17799-201ENSMUST00000183270 667 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm9864-201ENSMUST00000090043 1656 ntBASIC9.19□□□□□ -0.94
Chd6A3KFM7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Chd6A3KFM7 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Gm12254-201ENSMUST00000134617 471 ntBASIC9.18□□□□□ -0.94
Chd6A3KFM7 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Gm44716-201ENSMUST00000209007 710 ntBASIC9.18□□□□□ -0.94
Chd6A3KFM7 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Olfr1419-201ENSMUST00000087857 1160 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.18□□□□□ -0.94
Chd6A3KFM7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.18□□□□□ -0.94
Chd6A3KFM7 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms