Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm29358-202ENSMUST00000187941 3227 ntBASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC8.29□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm24891-201ENSMUST00000104391 136 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm8199-201ENSMUST00000121323 823 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm16505-201ENSMUST00000179981 232 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm27552-201ENSMUST00000183351 62 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm27844-201ENSMUST00000183613 62 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm38319-201ENSMUST00000194537 1266 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm43966-201ENSMUST00000203301 612 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm4978-201ENSMUST00000071565 801 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC8.28□□□□□ -1.08
Trav9n-2A0A0G2JDP3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms