Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm14071-201ENSMUST00000117817 509 ntBASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm5982-201ENSMUST00000196234 512 ntBASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm6450-201ENSMUST00000200896 574 ntBASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm10312-201ENSMUST00000078515 489 ntBASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmgn5Q9JL35 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Gm11531-201ENSMUST00000117614 555 ntBASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn5Q9JL35 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn5Q9JL35 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms