Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm12217-201ENSMUST00000118858 696 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm15566-201ENSMUST00000121130 590 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm15329-201ENSMUST00000121408 155 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm9540-201ENSMUST00000188230 478 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm18056-201ENSMUST00000207670 568 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm18061-201ENSMUST00000208350 562 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm18063-201ENSMUST00000208529 568 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm18052-201ENSMUST00000208750 559 ntBASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cpne8Q9DC53 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm15549-201ENSMUST00000121595 622 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm24844-201ENSMUST00000158679 127 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Olfml3-204ENSMUST00000169286 874 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm25732-201ENSMUST00000175168 60 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Gm18212-201ENSMUST00000211678 889 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms