Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp4cQ9D7F7 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm23949-201ENSMUST00000104027 127 ntBASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm28071-201ENSMUST00000190355 478 ntBASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Rps4l-202ENSMUST00000204242 789 ntBASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm807-202ENSMUST00000224929 408 ntBASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm26448-201ENSMUST00000082446 203 ntBASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp4cQ9D7F7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Mir6420-201ENSMUST00000185032 102 ntBASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Gm5982-201ENSMUST00000196234 512 ntBASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp4cQ9D7F7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Chmp4cQ9D7F7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chmp4cQ9D7F7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Gm43184-201ENSMUST00000197247 542 ntBASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Gm8385-201ENSMUST00000058999 643 ntBASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp4cQ9D7F7 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms