Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smurf1Q9CUN6 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smurf1Q9CUN6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
Smurf1Q9CUN6 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smurf1Q9CUN6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Gm10608-202ENSMUST00000213924 676 ntBASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smurf1Q9CUN6 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Gm12058-201ENSMUST00000118614 437 ntBASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Gm13570-201ENSMUST00000140763 309 ntBASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smurf1Q9CUN6 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Smurf1Q9CUN6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smurf1Q9CUN6 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smurf1Q9CUN6 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smurf1Q9CUN6 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smurf1Q9CUN6 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smurf1Q9CUN6 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smurf1Q9CUN6 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smurf1Q9CUN6 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms