Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm7150-201ENSMUST00000122032 981 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm16570-201ENSMUST00000161951 436 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Mir5120-201ENSMUST00000175020 78 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm9540-201ENSMUST00000188230 478 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm10774-201ENSMUST00000188689 204 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Spcs1-203ENSMUST00000226374 592 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.77□□□□□ -0.68
Clrn1Q8K445 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Clrn1Q8K445 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm14193-201ENSMUST00000105067 153 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm12247-201ENSMUST00000117585 670 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm9062-201ENSMUST00000117712 727 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm24844-201ENSMUST00000158679 127 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm37835-201ENSMUST00000193305 361 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm6722-201ENSMUST00000221586 390 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.77□□□□□ -0.69
Clrn1Q8K445 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clrn1Q8K445 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.76□□□□□ -0.69
Clrn1Q8K445 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clrn1Q8K445 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms