Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm2517-201ENSMUST00000215651 348 ntBASIC13.35□□□□□ -0.27
Vps53Q8CCB4 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Vps53Q8CCB4 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm11956-201ENSMUST00000119525 512 ntBASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm11960-201ENSMUST00000122068 925 ntBASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm23153-201ENSMUST00000175323 313 ntBASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Mir7076-201ENSMUST00000183519 74 ntBASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm34023-201ENSMUST00000195539 217 ntBASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps53Q8CCB4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Vps53Q8CCB4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps53Q8CCB4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Vps53Q8CCB4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vps53Q8CCB4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.33□□□□□ -0.27
Vps53Q8CCB4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Gm22138-201ENSMUST00000158748 128 ntBASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.33□□□□□ -0.28
Vps53Q8CCB4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps53Q8CCB4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps53Q8CCB4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps53Q8CCB4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms