Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC15.13■□□□□ 0.01
Cps1Q8C196 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm12136-201ENSMUST00000120460 1209 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm4462-201ENSMUST00000166453 492 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Cps1Q8C196 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm10238-201ENSMUST00000089689 408 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm15636-201ENSMUST00000119205 668 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm24140-201ENSMUST00000122773 326 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Mir6973a-201ENSMUST00000183646 78 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm7255-201ENSMUST00000187371 908 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm37858-201ENSMUST00000192759 1231 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm43811-201ENSMUST00000202862 695 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm5040-201ENSMUST00000218609 800 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 AC116797.2-202ENSMUST00000223587 1017 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 CT009713.2-201ENSMUST00000225532 1149 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 CT025679.1-201ENSMUST00000227106 449 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cps1Q8C196 Gm18806-201ENSMUST00000207607 1775 ntBASIC15.12■□□□□ 0.01
Cps1Q8C196 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC15.11■□□□□ 0.01
Cps1Q8C196 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC15.11■□□□□ 0.01
Cps1Q8C196 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC15.11■□□□□ 0.01
Cps1Q8C196 Gm5976-201ENSMUST00000180794 996 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC15.11■□□□□ 0.01
Cps1Q8C196 Gm8226-201ENSMUST00000190511 798 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 Gm43726-201ENSMUST00000199110 775 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 AC154585.1-201ENSMUST00000218917 997 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC15.11■□□□□ 0.01
Cps1Q8C196 AC154477.1-201ENSMUST00000226515 773 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 AC137842.2-201ENSMUST00000227734 797 ntBASIC15.11■□□□□ 0.01
Cps1Q8C196 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cps1Q8C196 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cps1Q8C196 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cps1Q8C196 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cps1Q8C196 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cps1Q8C196 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cps1Q8C196 Gm38111-201ENSMUST00000194817 2741 ntBASIC15.1■□□□□ 0.01
Cps1Q8C196 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC15.1■□□□□ 0.01
Cps1Q8C196 Gm8684-201ENSMUST00000195078 1564 ntBASIC15.1■□□□□ 0.01
Cps1Q8C196 Gm15746-201ENSMUST00000120684 1027 ntBASIC15.1■□□□□ 0.01
Cps1Q8C196 Gm14006-201ENSMUST00000122132 981 ntBASIC15.1■□□□□ 0.01
Cps1Q8C196 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms