Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Gm14127-201ENSMUST00000117906 678 ntBASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Gm38266-201ENSMUST00000194931 421 ntBASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Chmp2bQ8BJF9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm15276-201ENSMUST00000145953 498 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm3329-201ENSMUST00000159873 556 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm5616-201ENSMUST00000165252 384 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm8741-201ENSMUST00000174736 384 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm7940-201ENSMUST00000218195 769 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.7□□□□□ -0.54
Chmp2bQ8BJF9 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Chmp2bQ8BJF9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms