Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.68□□□□□ -0.7
Sox17Q61473 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.68□□□□□ -0.7
Sox17Q61473 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.68□□□□□ -0.7
Sox17Q61473 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.68□□□□□ -0.7
Sox17Q61473 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sox17Q61473 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.68□□□□□ -0.7
Sox17Q61473 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox17Q61473 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm13226-201ENSMUST00000117838 404 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 Gm11500-201ENSMUST00000118237 601 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm17150-201ENSMUST00000165577 381 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.67□□□□□ -0.7
Sox17Q61473 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm5370-201ENSMUST00000187187 574 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Morn2-202ENSMUST00000227729 656 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm5455-201ENSMUST00000058710 715 ntBASIC10.67□□□□□ -0.7
Sox17Q61473 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox17Q61473 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox17Q61473 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox17Q61473 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.66□□□□□ -0.7
Sox17Q61473 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Sox17Q61473 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox17Q61473 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.66□□□□□ -0.7
Sox17Q61473 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Sox17Q61473 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sox17Q61473 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox17Q61473 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms