Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Npas1P97459 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.59□□□□□ -0.87
Npas1P97459 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Gm4986-201ENSMUST00000119731 549 ntBASIC9.59□□□□□ -0.87
Npas1P97459 Gm14441-201ENSMUST00000121960 540 ntBASIC9.59□□□□□ -0.87
Npas1P97459 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.59□□□□□ -0.87
Npas1P97459 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.59□□□□□ -0.87
Npas1P97459 Gm28882-201ENSMUST00000185504 314 ntBASIC9.59□□□□□ -0.87
Npas1P97459 Gm18711-201ENSMUST00000199341 750 ntBASIC9.59□□□□□ -0.87
Npas1P97459 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Npas1P97459 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.59□□□□□ -0.87
Npas1P97459 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.59□□□□□ -0.87
Npas1P97459 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.59□□□□□ -0.87
Npas1P97459 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.59□□□□□ -0.87
Npas1P97459 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Npas1P97459 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Npas1P97459 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.58□□□□□ -0.88
Npas1P97459 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Npas1P97459 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Npas1P97459 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Npas1P97459 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.58□□□□□ -0.88
Npas1P97459 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Npas1P97459 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.58□□□□□ -0.88
Npas1P97459 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.58□□□□□ -0.88
Npas1P97459 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.58□□□□□ -0.88
Npas1P97459 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Npas1P97459 Gm42627-201ENSMUST00000197347 224 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Npas1P97459 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.58□□□□□ -0.88
Npas1P97459 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.58□□□□□ -0.88
Npas1P97459 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Npas1P97459 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Npas1P97459 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Npas1P97459 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.58□□□□□ -0.88
Npas1P97459 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Npas1P97459 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms