Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm43506-201ENSMUST00000200675 753 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm26670-202ENSMUST00000226862 340 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm23604-201ENSMUST00000104311 132 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm43163-201ENSMUST00000196571 442 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm6423-201ENSMUST00000204315 934 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm11996-201ENSMUST00000117538 915 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm15196-201ENSMUST00000121406 482 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm6216-201ENSMUST00000182390 687 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm38103-201ENSMUST00000191707 864 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm7525-201ENSMUST00000219425 454 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm10580-201ENSMUST00000097985 396 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm10581-201ENSMUST00000097986 231 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm10582-201ENSMUST00000097987 396 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm10583-201ENSMUST00000097988 396 ntBASIC10.6□□□□□ -0.71
Cacna1aP97445 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cacna1aP97445 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cacna1aP97445 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms