Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nup43P59235 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.81□□□□□ -0.68
Nup43P59235 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nup43P59235 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Gm11244-201ENSMUST00000121243 237 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Gm15329-201ENSMUST00000121408 155 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Gm8737-201ENSMUST00000122208 642 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.81□□□□□ -0.68
Nup43P59235 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.81□□□□□ -0.68
Nup43P59235 Gm23045-201ENSMUST00000175041 96 ntBASIC10.81□□□□□ -0.68
Nup43P59235 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.81□□□□□ -0.68
Nup43P59235 Mir6546-201ENSMUST00000184460 62 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Gm43186-201ENSMUST00000198130 824 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 AC132446.1-201ENSMUST00000222655 226 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nup43P59235 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nup43P59235 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.81□□□□□ -0.68
Nup43P59235 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.81□□□□□ -0.68
Nup43P59235 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nup43P59235 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.81□□□□□ -0.68
Nup43P59235 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup43P59235 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nup43P59235 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.8□□□□□ -0.68
Nup43P59235 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Gm15549-201ENSMUST00000121595 622 ntBASIC10.8□□□□□ -0.68
Nup43P59235 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.8□□□□□ -0.68
Nup43P59235 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nup43P59235 Gm9211-201ENSMUST00000182882 975 ntBASIC10.8□□□□□ -0.68
Nup43P59235 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.8□□□□□ -0.68
Nup43P59235 Gm42997-202ENSMUST00000200321 985 ntBASIC10.8□□□□□ -0.68
Nup43P59235 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nup43P59235 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.8□□□□□ -0.68
Nup43P59235 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.8□□□□□ -0.68
Nup43P59235 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nup43P59235 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nup43P59235 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup43P59235 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms