Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tpm1P58771 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.73□□□□□ -0.37
Tpm1P58771 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.73□□□□□ -0.37
Tpm1P58771 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.73□□□□□ -0.37
Tpm1P58771 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.73□□□□□ -0.37
Tpm1P58771 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.73□□□□□ -0.37
Tpm1P58771 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 Gm38158-201ENSMUST00000194617 339 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 Rps4l-202ENSMUST00000204242 789 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Tpm1P58771 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.73□□□□□ -0.37
Tpm1P58771 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.73□□□□□ -0.37
Tpm1P58771 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tpm1P58771 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.72□□□□□ -0.37
Tpm1P58771 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tpm1P58771 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.72□□□□□ -0.37
Tpm1P58771 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tpm1P58771 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Tpm1P58771 Gm12015-201ENSMUST00000117065 843 ntBASIC12.72□□□□□ -0.37
Tpm1P58771 Gm15547-201ENSMUST00000122152 333 ntBASIC12.72□□□□□ -0.37
Tpm1P58771 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Tpm1P58771 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tpm1P58771 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.72□□□□□ -0.37
Tpm1P58771 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.72□□□□□ -0.37
Tpm1P58771 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.72□□□□□ -0.37
Tpm1P58771 Gm4607-201ENSMUST00000206649 577 ntBASIC12.72□□□□□ -0.37
Tpm1P58771 Gm19187-201ENSMUST00000206781 892 ntBASIC12.72□□□□□ -0.37
Tpm1P58771 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tpm1P58771 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.72□□□□□ -0.37
Tpm1P58771 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tpm1P58771 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Tpm1P58771 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tpm1P58771 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.72□□□□□ -0.37
Tpm1P58771 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.71□□□□□ -0.37
Tpm1P58771 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.71□□□□□ -0.37
Tpm1P58771 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tpm1P58771 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms