Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.27□□□□□ -0.61
Sox18P43680 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.27□□□□□ -0.61
Sox18P43680 AC147628.1-201ENSMUST00000228193 688 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Gm43149-201ENSMUST00000198162 1422 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sox18P43680 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm22594-201ENSMUST00000104251 130 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox18P43680 Gm14270-201ENSMUST00000118388 846 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.26□□□□□ -0.61
Sox18P43680 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.26□□□□□ -0.61
Sox18P43680 Gm17070-201ENSMUST00000170463 784 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Gm24111-201ENSMUST00000175491 97 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.26□□□□□ -0.61
Sox18P43680 Gm7719-201ENSMUST00000182374 975 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Gm37981-201ENSMUST00000194280 535 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Gm43912-201ENSMUST00000204352 538 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Gm45258-201ENSMUST00000210042 853 ntBASIC11.26□□□□□ -0.61
Sox18P43680 AC159297.2-201ENSMUST00000219567 1075 ntBASIC11.26□□□□□ -0.61
Sox18P43680 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm46436-201ENSMUST00000221851 1294 ntBASIC11.26□□□□□ -0.61
Sox18P43680 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 AC154515.3-201ENSMUST00000225081 1159 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sox18P43680 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Zfp850-201ENSMUST00000099111 941 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Sox18P43680 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sox18P43680 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm38368-201ENSMUST00000193181 1335 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Gm42736-201ENSMUST00000200723 1353 ntBASIC11.26□□□□□ -0.61
Sox18P43680 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox18P43680 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sox18P43680 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.26□□□□□ -0.61
Sox18P43680 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox18P43680 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox18P43680 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Sox18P43680 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox18P43680 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms