Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC8.82□□□□□ -1
Ccl1P10146 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccl1P10146 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ccl1P10146 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccl1P10146 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 Gm1335-201ENSMUST00000121653 386 ntBASIC8.81□□□□□ -1
Ccl1P10146 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.81□□□□□ -1
Ccl1P10146 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC8.81□□□□□ -1
Ccl1P10146 Gm8801-201ENSMUST00000173255 1064 ntBASIC8.81□□□□□ -1
Ccl1P10146 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Gm29649-201ENSMUST00000185649 419 ntBASIC8.81□□□□□ -1
Ccl1P10146 Gm18187-201ENSMUST00000196476 984 ntBASIC8.81□□□□□ -1
Ccl1P10146 Gm42442-201ENSMUST00000197951 1133 ntBASIC8.81□□□□□ -1
Ccl1P10146 Gm43966-201ENSMUST00000203301 612 ntBASIC8.81□□□□□ -1
Ccl1P10146 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 CT030657.3-201ENSMUST00000222707 1200 ntBASIC8.81□□□□□ -1
Ccl1P10146 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccl1P10146 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Ccl1P10146 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC8.81□□□□□ -1
Ccl1P10146 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Ccl1P10146 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccl1P10146 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccl1P10146 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccl1P10146 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Gm9115-201ENSMUST00000120192 1348 ntBASIC8.8□□□□□ -1
Ccl1P10146 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Gm45161-201ENSMUST00000207316 2263 ntBASIC8.8□□□□□ -1
Ccl1P10146 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccl1P10146 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Gm37737-201ENSMUST00000195013 1638 ntBASIC8.8□□□□□ -1
Ccl1P10146 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC8.8□□□□□ -1
Ccl1P10146 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Gm23984-201ENSMUST00000157139 203 ntBASIC8.8□□□□□ -1
Ccl1P10146 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC8.8□□□□□ -1
Ccl1P10146 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC8.8□□□□□ -1
Ccl1P10146 Gm6222-202ENSMUST00000182143 629 ntBASIC8.8□□□□□ -1
Ccl1P10146 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Gm3890-201ENSMUST00000182416 207 ntBASIC8.8□□□□□ -1
Ccl1P10146 Gm27682-201ENSMUST00000183930 110 ntBASIC8.8□□□□□ -1
Ccl1P10146 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC8.8□□□□□ -1
Ccl1P10146 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC8.8□□□□□ -1
Ccl1P10146 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccl1P10146 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC8.8□□□□□ -1
Ccl1P10146 Gm18065-201ENSMUST00000221395 526 ntBASIC8.8□□□□□ -1
Ccl1P10146 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccl1P10146 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms