Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Gm5455-201ENSMUST00000058710 715 ntBASIC10.48□□□□□ -0.73
Zfp28P10078 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Zfp28P10078 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.48□□□□□ -0.73
Zfp28P10078 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Zfp28P10078 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.48□□□□□ -0.73
Zfp28P10078 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Zfp28P10078 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Zfp28P10078 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.48□□□□□ -0.73
Zfp28P10078 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.47□□□□□ -0.73
Zfp28P10078 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.47□□□□□ -0.73
Zfp28P10078 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Zfp28P10078 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.47□□□□□ -0.73
Zfp28P10078 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.47□□□□□ -0.73
Zfp28P10078 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.47□□□□□ -0.73
Zfp28P10078 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Gm6963-201ENSMUST00000147879 379 ntBASIC10.47□□□□□ -0.73
Zfp28P10078 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.47□□□□□ -0.73
Zfp28P10078 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.47□□□□□ -0.73
Zfp28P10078 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Zfp28P10078 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Zfp28P10078 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Zfp28P10078 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.46□□□□□ -0.73
Zfp28P10078 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Zfp28P10078 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Zfp28P10078 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.46□□□□□ -0.73
Zfp28P10078 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.46□□□□□ -0.73
Zfp28P10078 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Zfp28P10078 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms