Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hoxc9P09633 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.76□□□□□ -0.05
Hoxc9P09633 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.75□□□□□ -0.05
Hoxc9P09633 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Gm12986-201ENSMUST00000119037 967 ntBASIC14.75□□□□□ -0.05
Hoxc9P09633 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.75□□□□□ -0.05
Hoxc9P09633 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hoxc9P09633 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hoxc9P09633 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hoxc9P09633 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hoxc9P09633 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.74□□□□□ -0.05
Hoxc9P09633 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Hoxc9P09633 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.74□□□□□ -0.05
Hoxc9P09633 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC14.74□□□□□ -0.05
Hoxc9P09633 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.74□□□□□ -0.05
Hoxc9P09633 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
Hoxc9P09633 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.74□□□□□ -0.05
Hoxc9P09633 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.74□□□□□ -0.05
Hoxc9P09633 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hoxc9P09633 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.74□□□□□ -0.05
Hoxc9P09633 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.74□□□□□ -0.05
Hoxc9P09633 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hoxc9P09633 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Hoxc9P09633 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
Hoxc9P09633 Gm22937-201ENSMUST00000103954 131 ntBASIC14.73□□□□□ -0.05
Hoxc9P09633 Gm22594-201ENSMUST00000104251 130 ntBASIC14.73□□□□□ -0.05
Hoxc9P09633 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Gm15136-201ENSMUST00000120552 533 ntBASIC14.73□□□□□ -0.05
Hoxc9P09633 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hoxc9P09633 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms