Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 AC154806.7-201ENSMUST00000227998 202 ntBASIC14.58□□□□□ -0.08
Ubr1O70481 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ubr1O70481 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ubr1O70481 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ubr1O70481 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.58□□□□□ -0.08
Ubr1O70481 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ubr1O70481 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC14.58□□□□□ -0.08
Ubr1O70481 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC14.57□□□□□ -0.08
Ubr1O70481 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ubr1O70481 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ubr1O70481 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Gm28032-201ENSMUST00000184104 96 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 Gm8384-201ENSMUST00000190905 704 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Ubr1O70481 AC160929.1-201ENSMUST00000221247 415 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 CT025679.1-201ENSMUST00000227106 449 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ubr1O70481 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
Ubr1O70481 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ubr1O70481 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ubr1O70481 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ubr1O70481 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ubr1O70481 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ubr1O70481 Gm23769-201ENSMUST00000104441 121 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Mir1249-201ENSMUST00000116791 98 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 Gm8019-201ENSMUST00000119317 587 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 Gm6441-201ENSMUST00000120983 696 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC14.57□□□□□ -0.08
Ubr1O70481 Trav11n-201ENSMUST00000200113 343 ntBASIC14.57□□□□□ -0.08
Ubr1O70481 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ubr1O70481 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ubr1O70481 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.57□□□□□ -0.08
Ubr1O70481 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr1O70481 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ubr1O70481 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ubr1O70481 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ubr1O70481 Gm8152-201ENSMUST00000120842 637 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Gm24312-201ENSMUST00000178677 119 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Gm7928-201ENSMUST00000181249 701 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Gm7627-201ENSMUST00000183205 999 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Gm7047-201ENSMUST00000196224 1063 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC14.56□□□□□ -0.08
Ubr1O70481 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC14.56□□□□□ -0.08
Ubr1O70481 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ubr1O70481 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.56□□□□□ -0.08
Ubr1O70481 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ubr1O70481 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ubr1O70481 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms