Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gm14021-201ENSMUST00000117683 961 ntBASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gm15636-201ENSMUST00000119205 668 ntBASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gm23458-201ENSMUST00000083257 169 ntBASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.11□□□□□ -0.95
Usp9yF8VPU6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm38348-201ENSMUST00000191718 2273 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm4294-201ENSMUST00000105169 614 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Fam220-ps-201ENSMUST00000116535 783 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm12240-201ENSMUST00000120178 229 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm15197-201ENSMUST00000120526 478 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm5529-201ENSMUST00000165691 891 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm44304-201ENSMUST00000200509 145 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 AC132384.2-201ENSMUST00000218018 526 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 AC154407.1-201ENSMUST00000226777 526 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm25591-201ENSMUST00000177317 94 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm7928-201ENSMUST00000181249 701 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Gm9102-201ENSMUST00000219250 465 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Elobl-202ENSMUST00000082339 300 ntBASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp9yF8VPU6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp9yF8VPU6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp9yF8VPU6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp9yF8VPU6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp9yF8VPU6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp9yF8VPU6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp9yF8VPU6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Usp9yF8VPU6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Usp9yF8VPU6 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms