Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm11930-201ENSMUST00000117788 190 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm4310-201ENSMUST00000177847 889 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm27516-201ENSMUST00000184237 98 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gzmn-202ENSMUST00000225535 989 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm38117-201ENSMUST00000194653 939 ntBASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm3961-201ENSMUST00000204425 994 ntBASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms