Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Gm16288-201ENSMUST00000137940 367 ntBASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Gm10238-201ENSMUST00000089689 408 ntBASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col4a6B1AVK5 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm37688-201ENSMUST00000195195 465 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm14006-201ENSMUST00000122132 981 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm6291-201ENSMUST00000179994 309 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm7255-201ENSMUST00000187371 908 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm5254-201ENSMUST00000188353 977 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm9619-201ENSMUST00000211587 762 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Gm5040-201ENSMUST00000218609 800 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col4a6B1AVK5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms