Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh17Q9R100 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.15□□□□□ -0.62
Cdh17Q9R100 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.15□□□□□ -0.62
Cdh17Q9R100 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Gm2965-201ENSMUST00000198365 343 ntBASIC11.15□□□□□ -0.62
Cdh17Q9R100 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.15□□□□□ -0.62
Cdh17Q9R100 Gm6722-201ENSMUST00000221586 390 ntBASIC11.15□□□□□ -0.62
Cdh17Q9R100 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh17Q9R100 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh17Q9R100 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh17Q9R100 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh17Q9R100 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh17Q9R100 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh17Q9R100 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.15□□□□□ -0.63
Cdh17Q9R100 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh17Q9R100 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Gm9353-201ENSMUST00000200472 604 ntBASIC11.14□□□□□ -0.63
Cdh17Q9R100 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.14□□□□□ -0.63
Cdh17Q9R100 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.14□□□□□ -0.63
Cdh17Q9R100 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdh17Q9R100 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh17Q9R100 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdh17Q9R100 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh17Q9R100 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh17Q9R100 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh17Q9R100 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh17Q9R100 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh17Q9R100 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh17Q9R100 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh17Q9R100 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms