Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.51□□□□□ -0.57
Trim33Q99PP7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim33Q99PP7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim33Q99PP7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.51□□□□□ -0.57
Trim33Q99PP7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Gm38123-201ENSMUST00000194990 2779 ntBASIC11.5□□□□□ -0.57
Trim33Q99PP7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Gm12501-201ENSMUST00000119163 529 ntBASIC11.5□□□□□ -0.57
Trim33Q99PP7 Gm8566-201ENSMUST00000120174 465 ntBASIC11.5□□□□□ -0.57
Trim33Q99PP7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Gm25732-201ENSMUST00000175168 60 ntBASIC11.5□□□□□ -0.57
Trim33Q99PP7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim33Q99PP7 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.49□□□□□ -0.57
Trim33Q99PP7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm4909-201ENSMUST00000118749 794 ntBASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm18734-201ENSMUST00000172937 808 ntBASIC11.49□□□□□ -0.57
Trim33Q99PP7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Rps4l-202ENSMUST00000204242 789 ntBASIC11.49□□□□□ -0.57
Trim33Q99PP7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm21811-201ENSMUST00000096485 930 ntBASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim33Q99PP7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim33Q99PP7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim33Q99PP7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms