Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh18Q8VHR0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Olfr284-202ENSMUST00000206647 966 ntBASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Gm6013-201ENSMUST00000212264 699 ntBASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Gm18935-201ENSMUST00000212692 664 ntBASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 AC165148.1-201ENSMUST00000224795 2372 ntBASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh18Q8VHR0 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Pcdh18Q8VHR0 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Pcdh18Q8VHR0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.63
Pcdh18Q8VHR0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm25214-201ENSMUST00000104573 129 ntBASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm15610-201ENSMUST00000120584 195 ntBASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm14247-201ENSMUST00000120950 237 ntBASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm18054-201ENSMUST00000207539 555 ntBASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.08□□□□□ -0.64
Pcdh18Q8VHR0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms