Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gm25148-201ENSMUST00000104611 123 ntBASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gm16166-201ENSMUST00000118291 787 ntBASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gm9089-201ENSMUST00000122027 526 ntBASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gm37981-201ENSMUST00000194280 535 ntBASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gm43186-201ENSMUST00000198130 824 ntBASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Brf1Q8CFK2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm11949-201ENSMUST00000117640 372 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm13408-201ENSMUST00000119822 798 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm13935-201ENSMUST00000121859 798 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Olfml3-204ENSMUST00000169286 874 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm43852-201ENSMUST00000202098 917 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm45856-201ENSMUST00000212752 416 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Brf1Q8CFK2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.78□□□□□ -0.2
Brf1Q8CFK2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms