Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm12957-201ENSMUST00000117835 377 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm20495-201ENSMUST00000173902 235 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm3096-201ENSMUST00000185770 364 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm45598-202ENSMUST00000210719 986 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm10608-202ENSMUST00000213924 676 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm7940-201ENSMUST00000218195 769 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lysmd4Q8CC84 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Gm8885-201ENSMUST00000189382 598 ntBASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Rps4l-202ENSMUST00000204242 789 ntBASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Gm30285-201ENSMUST00000214614 422 ntBASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Lysmd4Q8CC84 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms