Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Zfp398Q8BV16 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm14130-201ENSMUST00000118417 987 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm7003-201ENSMUST00000195089 312 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm6439-201ENSMUST00000199849 862 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm45113-201ENSMUST00000207518 165 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Btrc-209ENSMUST00000224478 2194 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp398Q8BV16 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Gm20495-201ENSMUST00000173902 235 ntBASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Gm44008-201ENSMUST00000204345 412 ntBASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp398Q8BV16 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms