Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm42657-201ENSMUST00000201746 211 ntBASIC9.43□□□□□ -0.9
Sox21Q811W0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC9.43□□□□□ -0.9
Sox21Q811W0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 BC043934-202ENSMUST00000185694 2356 ntBASIC9.43□□□□□ -0.9
Sox21Q811W0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sox21Q811W0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Sox21Q811W0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm1848-201ENSMUST00000120711 789 ntBASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm24844-201ENSMUST00000158679 127 ntBASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm44980-201ENSMUST00000205826 314 ntBASIC9.42□□□□□ -0.9
Sox21Q811W0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.42□□□□□ -0.9
Sox21Q811W0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Rgr-203ENSMUST00000225070 4704 ntBASIC9.42□□□□□ -0.9
Sox21Q811W0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sox21Q811W0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.41□□□□□ -0.9
Sox21Q811W0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.41□□□□□ -0.9
Sox21Q811W0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.41□□□□□ -0.9
Sox21Q811W0 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Sox21Q811W0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Sox21Q811W0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Sox21Q811W0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.41□□□□□ -0.9
Sox21Q811W0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Sox21Q811W0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sox21Q811W0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Gm11892-201ENSMUST00000117711 1202 ntBASIC9.41□□□□□ -0.9
Sox21Q811W0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.41□□□□□ -0.9
Sox21Q811W0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sox21Q811W0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms