Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh19Q80TF3 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm26013-201ENSMUST00000104404 119 ntBASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm10731-201ENSMUST00000181171 448 ntBASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm23105-201ENSMUST00000083719 134 ntBASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh19Q80TF3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm22442-201ENSMUST00000157256 144 ntBASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm38314-201ENSMUST00000195709 625 ntBASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh19Q80TF3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms