Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.18□□□□□ -0.46
CtifQ6PEE2 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm14999-201ENSMUST00000121039 624 ntBASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm17420-201ENSMUST00000164753 153 ntBASIC12.17□□□□□ -0.46
CtifQ6PEE2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.17□□□□□ -0.46
CtifQ6PEE2 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.17□□□□□ -0.46
CtifQ6PEE2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.17□□□□□ -0.46
CtifQ6PEE2 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.17□□□□□ -0.46
CtifQ6PEE2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.17□□□□□ -0.46
CtifQ6PEE2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.17□□□□□ -0.46
CtifQ6PEE2 Spata33-207ENSMUST00000212760 4074 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 AC144938.1-201ENSMUST00000223994 2167 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm10478-201ENSMUST00000084451 396 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.16□□□□□ -0.46
CtifQ6PEE2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms