Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.62■□□□□ 0.73
Smarca2Q6DIC0 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 AC154585.1-201ENSMUST00000218917 997 ntBASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gm25514-201ENSMUST00000083860 135 ntBASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Gm4778-201ENSMUST00000098878 1098 ntBASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarca2Q6DIC0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Mir598-201ENSMUST00000102094 79 ntBASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Gm9409-201ENSMUST00000197017 316 ntBASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 AC124356.1-201ENSMUST00000221469 698 ntBASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarca2Q6DIC0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Gm15258-201ENSMUST00000153801 741 ntBASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Mir8111-201ENSMUST00000184463 137 ntBASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Gm7047-201ENSMUST00000196224 1063 ntBASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Gm45745-201ENSMUST00000211447 1180 ntBASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 AC101205.2-201ENSMUST00000226206 715 ntBASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 AC118639.1-202ENSMUST00000226957 653 ntBASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 AC141884.2-201ENSMUST00000228811 775 ntBASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
Smarca2Q6DIC0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Gm7964-201ENSMUST00000051522 1378 ntBASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Mir6934-201ENSMUST00000183965 62 ntBASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Gm38111-201ENSMUST00000194817 2741 ntBASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smarca2Q6DIC0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms