Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Gm42858-201ENSMUST00000202512 1704 ntBASIC11□□□□□ -0.65
Col12a1Q60847 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11□□□□□ -0.65
Col12a1Q60847 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11□□□□□ -0.65
Col12a1Q60847 Gm28180-201ENSMUST00000189608 722 ntBASIC11□□□□□ -0.65
Col12a1Q60847 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col12a1Q60847 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col12a1Q60847 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC10.99□□□□□ -0.65
Col12a1Q60847 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm6881-201ENSMUST00000121811 833 ntBASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm23555-201ENSMUST00000157815 135 ntBASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm17799-201ENSMUST00000183270 667 ntBASIC10.99□□□□□ -0.65
Col12a1Q60847 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm3527-201ENSMUST00000198905 460 ntBASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm25483-201ENSMUST00000083224 227 ntBASIC10.99□□□□□ -0.65
Col12a1Q60847 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.99□□□□□ -0.65
Col12a1Q60847 AC132833.1-202ENSMUST00000228875 1690 ntBASIC10.99□□□□□ -0.65
Col12a1Q60847 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Col12a1Q60847 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.99□□□□□ -0.65
Col12a1Q60847 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col12a1Q60847 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm12072-201ENSMUST00000118293 715 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm8754-201ENSMUST00000118391 520 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm12254-201ENSMUST00000134617 471 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm27833-201ENSMUST00000184285 124 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm37819-201ENSMUST00000194626 1065 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm6713-201ENSMUST00000216137 1446 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 AC165260.2-201ENSMUST00000225371 395 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.98□□□□□ -0.65
Col12a1Q60847 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.98□□□□□ -0.65
Col12a1Q60847 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col12a1Q60847 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms