Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rc3h1Q4VGL6 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm12795-201ENSMUST00000117594 539 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm28324-201ENSMUST00000187913 264 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm29067-201ENSMUST00000190821 470 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm38216-201ENSMUST00000194872 1214 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 AC154828.2-201ENSMUST00000220908 1070 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rc3h1Q4VGL6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rc3h1Q4VGL6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Gm22119-201ENSMUST00000175594 99 ntBASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Mir7051-201ENSMUST00000184167 73 ntBASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Gm28923-201ENSMUST00000187755 322 ntBASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Gm8197-202ENSMUST00000193422 934 ntBASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 AC125539.1-201ENSMUST00000227423 622 ntBASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rc3h1Q4VGL6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rc3h1Q4VGL6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rc3h1Q4VGL6 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rc3h1Q4VGL6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms