Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.63□□□□□ -0.71
Cacna1aP97445 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.63□□□□□ -0.71
Cacna1aP97445 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.62□□□□□ -0.71
Cacna1aP97445 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Cacna1aP97445 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.62□□□□□ -0.71
Cacna1aP97445 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm13192-201ENSMUST00000101199 208 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm10443-201ENSMUST00000119024 210 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm24328-201ENSMUST00000175104 67 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm7741-201ENSMUST00000181445 989 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm8824-201ENSMUST00000182962 990 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm33707-201ENSMUST00000195135 569 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm20568-201ENSMUST00000197129 208 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.62□□□□□ -0.71
Cacna1aP97445 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cacna1aP97445 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.62□□□□□ -0.71
Cacna1aP97445 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cacna1aP97445 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cacna1aP97445 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm42432-201ENSMUST00000197902 1617 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cacna1aP97445 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm23612-201ENSMUST00000103823 110 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm12986-201ENSMUST00000119037 967 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm23576-201ENSMUST00000179918 110 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm8384-201ENSMUST00000190905 704 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm43866-201ENSMUST00000203894 839 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Gm9204-201ENSMUST00000212641 947 ntBASIC10.61□□□□□ -0.71
Cacna1aP97445 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.61□□□□□ -0.71
Cacna1aP97445 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cacna1aP97445 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms