Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm6158-201ENSMUST00000109467 904 ntBASIC14.35□□□□□ -0.11
Nkx2-3P97334 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm18801-201ENSMUST00000186616 536 ntBASIC14.35□□□□□ -0.11
Nkx2-3P97334 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC14.35□□□□□ -0.11
Nkx2-3P97334 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm43966-201ENSMUST00000203301 612 ntBASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm18035-201ENSMUST00000211962 589 ntBASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm14667-201ENSMUST00000119448 1350 ntBASIC14.34□□□□□ -0.11
Nkx2-3P97334 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm43127-201ENSMUST00000195890 2789 ntBASIC14.34□□□□□ -0.11
Nkx2-3P97334 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm11952-201ENSMUST00000121172 821 ntBASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm15196-201ENSMUST00000121406 482 ntBASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm37436-201ENSMUST00000193842 1085 ntBASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm37452-201ENSMUST00000194416 1160 ntBASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.34□□□□□ -0.11
Nkx2-3P97334 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.34□□□□□ -0.11
Nkx2-3P97334 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-3P97334 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Nkx2-3P97334 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.33□□□□□ -0.11
Nkx2-3P97334 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.33□□□□□ -0.11
Nkx2-3P97334 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-3P97334 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-3P97334 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-3P97334 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nkx2-3P97334 Cog3-203ENSMUST00000227473 4197 ntBASIC14.33□□□□□ -0.12
Nkx2-3P97334 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm11996-201ENSMUST00000117538 915 ntBASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm13183-201ENSMUST00000118615 789 ntBASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm12943-201ENSMUST00000119616 210 ntBASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm12461-201ENSMUST00000120231 1239 ntBASIC14.33□□□□□ -0.12
Nkx2-3P97334 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm25998-201ENSMUST00000175397 53 ntBASIC14.33□□□□□ -0.12
Nkx2-3P97334 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-3P97334 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nkx2-3P97334 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms