Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cxcl5P50228 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cxcl5P50228 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.03□□□□□ -0.8
Cxcl5P50228 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.03□□□□□ -0.8
Cxcl5P50228 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cxcl5P50228 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Cxcl5P50228 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cxcl5P50228 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.02□□□□□ -0.8
Cxcl5P50228 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.02□□□□□ -0.8
Cxcl5P50228 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.02□□□□□ -0.8
Cxcl5P50228 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Cxcl5P50228 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.02□□□□□ -0.8
Cxcl5P50228 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Cxcl5P50228 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.8
Cxcl5P50228 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.8
Cxcl5P50228 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cxcl5P50228 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm3096-201ENSMUST00000185770 364 ntBASIC10.02□□□□□ -0.81
Cxcl5P50228 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm6621-201ENSMUST00000193251 772 ntBASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.02□□□□□ -0.81
Cxcl5P50228 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cxcl5P50228 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.02□□□□□ -0.81
Cxcl5P50228 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl5P50228 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cxcl5P50228 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.01□□□□□ -0.81
Cxcl5P50228 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.01□□□□□ -0.81
Cxcl5P50228 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.01□□□□□ -0.81
Cxcl5P50228 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.01□□□□□ -0.81
Cxcl5P50228 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cxcl5P50228 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.01□□□□□ -0.81
Cxcl5P50228 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cxcl5P50228 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cxcl5P50228 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl5P50228 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms