Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.41□□□□□ -0.9
VhlP40338 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.41□□□□□ -0.9
VhlP40338 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.41□□□□□ -0.9
VhlP40338 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.41□□□□□ -0.9
VhlP40338 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VhlP40338 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
VhlP40338 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.41□□□□□ -0.9
VhlP40338 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.4□□□□□ -0.9
VhlP40338 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
VhlP40338 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.4□□□□□ -0.9
VhlP40338 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
VhlP40338 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.4□□□□□ -0.9
VhlP40338 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
VhlP40338 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.4□□□□□ -0.9
VhlP40338 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.4□□□□□ -0.9
VhlP40338 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.4□□□□□ -0.9
VhlP40338 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.4□□□□□ -0.9
VhlP40338 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Gm23931-201ENSMUST00000103842 109 ntBASIC9.4□□□□□ -0.9
VhlP40338 Gm22018-201ENSMUST00000104357 131 ntBASIC9.4□□□□□ -0.9
VhlP40338 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
VhlP40338 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
VhlP40338 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.4□□□□□ -0.9
VhlP40338 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.4□□□□□ -0.9
VhlP40338 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.4□□□□□ -0.9
VhlP40338 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.4□□□□□ -0.9
VhlP40338 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
VhlP40338 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
VhlP40338 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VhlP40338 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
VhlP40338 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VhlP40338 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.4□□□□□ -0.91
VhlP40338 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
VhlP40338 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
VhlP40338 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.4□□□□□ -0.91
VhlP40338 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
VhlP40338 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
VhlP40338 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.39□□□□□ -0.91
VhlP40338 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
VhlP40338 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.39□□□□□ -0.91
VhlP40338 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.39□□□□□ -0.91
VhlP40338 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.39□□□□□ -0.91
VhlP40338 Gm6963-201ENSMUST00000147879 379 ntBASIC9.39□□□□□ -0.91
VhlP40338 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.39□□□□□ -0.91
VhlP40338 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Gm3096-201ENSMUST00000185770 364 ntBASIC9.39□□□□□ -0.91
VhlP40338 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms