Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gm14193-201ENSMUST00000105067 153 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Timp3P39876 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm15566-201ENSMUST00000121130 590 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gm22144-201ENSMUST00000157402 102 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Mir6546-201ENSMUST00000184460 62 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.45□□□□□ -0.9
Timp3P39876 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm44545-201ENSMUST00000208262 746 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Gm6108-201ENSMUST00000208365 367 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gm44551-201ENSMUST00000208804 171 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Gm9132-201ENSMUST00000210182 832 ntBASIC9.45□□□□□ -0.9
Timp3P39876 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.45□□□□□ -0.9
Timp3P39876 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Timp3P39876 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.44□□□□□ -0.9
Timp3P39876 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Gm15352-201ENSMUST00000118696 270 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Gm13888-201ENSMUST00000119148 422 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Gm14460-201ENSMUST00000121511 639 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.44□□□□□ -0.9
Timp3P39876 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.44□□□□□ -0.9
Timp3P39876 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Gm4310-201ENSMUST00000177847 889 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Gm9540-201ENSMUST00000188230 478 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Gm38117-201ENSMUST00000194653 939 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.44□□□□□ -0.9
Timp3P39876 Gm17931-201ENSMUST00000208132 634 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.44□□□□□ -0.9
Timp3P39876 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.44□□□□□ -0.9
Timp3P39876 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.44□□□□□ -0.9
Timp3P39876 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Timp3P39876 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Timp3P39876 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.44□□□□□ -0.9
Timp3P39876 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.44□□□□□ -0.9
Timp3P39876 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Timp3P39876 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms