Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rfc1P35601 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfc1P35601 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.07□□□□□ -0.48
Rfc1P35601 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.07□□□□□ -0.48
Rfc1P35601 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.07□□□□□ -0.48
Rfc1P35601 Gm42693-201ENSMUST00000196779 631 ntBASIC12.07□□□□□ -0.48
Rfc1P35601 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.07□□□□□ -0.48
Rfc1P35601 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.07□□□□□ -0.48
Rfc1P35601 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.07□□□□□ -0.48
Rfc1P35601 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.07□□□□□ -0.48
Rfc1P35601 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.07□□□□□ -0.48
Rfc1P35601 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.07□□□□□ -0.48
Rfc1P35601 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.07□□□□□ -0.48
Rfc1P35601 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rfc1P35601 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Rfc1P35601 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
Rfc1P35601 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 AC131029.1-201ENSMUST00000226391 2929 ntBASIC12.07□□□□□ -0.48
Rfc1P35601 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.06□□□□□ -0.48
Rfc1P35601 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Gm10417-201ENSMUST00000194341 3522 ntBASIC12.06□□□□□ -0.48
Rfc1P35601 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Gm10434-201ENSMUST00000101158 471 ntBASIC12.06□□□□□ -0.48
Rfc1P35601 Gm14247-201ENSMUST00000120950 237 ntBASIC12.06□□□□□ -0.48
Rfc1P35601 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.06□□□□□ -0.48
Rfc1P35601 Gm5706-201ENSMUST00000181525 993 ntBASIC12.06□□□□□ -0.48
Rfc1P35601 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.06□□□□□ -0.48
Rfc1P35601 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Rfc1P35601 Rgr-203ENSMUST00000225070 4704 ntBASIC12.06□□□□□ -0.48
Rfc1P35601 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.06□□□□□ -0.48
Rfc1P35601 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.06□□□□□ -0.48
Rfc1P35601 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rfc1P35601 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.06□□□□□ -0.48
Rfc1P35601 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfc1P35601 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rfc1P35601 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfc1P35601 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfc1P35601 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.05□□□□□ -0.48
Rfc1P35601 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.05□□□□□ -0.48
Rfc1P35601 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.05□□□□□ -0.48
Rfc1P35601 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.05□□□□□ -0.48
Rfc1P35601 AY702102-202ENSMUST00000194651 1173 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 Gm6439-201ENSMUST00000199849 862 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 Gm45880-201ENSMUST00000213041 853 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.05□□□□□ -0.48
Rfc1P35601 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.05□□□□□ -0.48
Rfc1P35601 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rfc1P35601 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rfc1P35601 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rfc1P35601 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 162.8 ms