Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nfkb1P25799 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.81□□□□□ -0.52
Nfkb1P25799 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Gm15329-201ENSMUST00000121408 155 ntBASIC11.81□□□□□ -0.52
Nfkb1P25799 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.81□□□□□ -0.52
Nfkb1P25799 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Mir6958-201ENSMUST00000184207 73 ntBASIC11.81□□□□□ -0.52
Nfkb1P25799 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Gm18065-201ENSMUST00000221395 526 ntBASIC11.81□□□□□ -0.52
Nfkb1P25799 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nfkb1P25799 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.81□□□□□ -0.52
Nfkb1P25799 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.8□□□□□ -0.52
Nfkb1P25799 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Gm25766-201ENSMUST00000104101 131 ntBASIC11.8□□□□□ -0.52
Nfkb1P25799 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Gm11500-201ENSMUST00000118237 601 ntBASIC11.8□□□□□ -0.52
Nfkb1P25799 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.8□□□□□ -0.52
Nfkb1P25799 Gm16397-201ENSMUST00000122201 494 ntBASIC11.8□□□□□ -0.52
Nfkb1P25799 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Gm37028-201ENSMUST00000194276 107 ntBASIC11.8□□□□□ -0.52
Nfkb1P25799 Gm43058-201ENSMUST00000197645 625 ntBASIC11.8□□□□□ -0.52
Nfkb1P25799 Gm45594-201ENSMUST00000211717 241 ntBASIC11.8□□□□□ -0.52
Nfkb1P25799 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nfkb1P25799 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nfkb1P25799 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.79□□□□□ -0.52
Nfkb1P25799 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nfkb1P25799 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms