Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm43758-201ENSMUST00000199500 367 ntBASIC11.03□□□□□ -0.64
BdnfP21237 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.03□□□□□ -0.64
BdnfP21237 Gm19287-201ENSMUST00000203190 358 ntBASIC11.03□□□□□ -0.64
BdnfP21237 Gm44651-201ENSMUST00000207343 372 ntBASIC11.03□□□□□ -0.64
BdnfP21237 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.03□□□□□ -0.64
BdnfP21237 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.03□□□□□ -0.64
BdnfP21237 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.03□□□□□ -0.64
BdnfP21237 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.03□□□□□ -0.64
BdnfP21237 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
BdnfP21237 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
BdnfP21237 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
BdnfP21237 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.03□□□□□ -0.64
BdnfP21237 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.03□□□□□ -0.64
BdnfP21237 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
BdnfP21237 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
BdnfP21237 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.03□□□□□ -0.64
BdnfP21237 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
BdnfP21237 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
BdnfP21237 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
BdnfP21237 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
BdnfP21237 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
BdnfP21237 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.02□□□□□ -0.64
BdnfP21237 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.02□□□□□ -0.64
BdnfP21237 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
BdnfP21237 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
BdnfP21237 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
BdnfP21237 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
BdnfP21237 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.02□□□□□ -0.65
BdnfP21237 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.02□□□□□ -0.65
BdnfP21237 Gm14723-201ENSMUST00000118686 215 ntBASIC11.02□□□□□ -0.65
BdnfP21237 Gm15004-201ENSMUST00000119192 630 ntBASIC11.02□□□□□ -0.65
BdnfP21237 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.02□□□□□ -0.65
BdnfP21237 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.02□□□□□ -0.65
BdnfP21237 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.02□□□□□ -0.65
BdnfP21237 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.02□□□□□ -0.65
BdnfP21237 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.02□□□□□ -0.65
BdnfP21237 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
BdnfP21237 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.02□□□□□ -0.65
BdnfP21237 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.02□□□□□ -0.65
BdnfP21237 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
BdnfP21237 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
BdnfP21237 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
BdnfP21237 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.02□□□□□ -0.65
BdnfP21237 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
BdnfP21237 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.02□□□□□ -0.65
BdnfP21237 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
BdnfP21237 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
BdnfP21237 Gm11511-201ENSMUST00000118146 540 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Gm14381-201ENSMUST00000122105 414 ntBASIC11.01□□□□□ -0.65
BdnfP21237 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.01□□□□□ -0.65
BdnfP21237 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
BdnfP21237 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
BdnfP21237 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
BdnfP21237 Gm25700-201ENSMUST00000177693 110 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms