Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Gm8459-201ENSMUST00000162504 760 ntBASIC11.07□□□□□ -0.64
Fv4P11370 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Fv4P11370 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.07□□□□□ -0.64
Fv4P11370 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Fv4P11370 Olfr582-201ENSMUST00000098212 960 ntBASIC11.07□□□□□ -0.64
Fv4P11370 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Fv4P11370 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Fv4P11370 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Fv4P11370 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Fv4P11370 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Fv4P11370 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.06□□□□□ -0.64
Fv4P11370 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.06□□□□□ -0.64
Fv4P11370 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.06□□□□□ -0.64
Fv4P11370 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Fv4P11370 Gm25881-201ENSMUST00000157783 103 ntBASIC11.06□□□□□ -0.64
Fv4P11370 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Gm18734-201ENSMUST00000172937 808 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Gm8100-201ENSMUST00000182906 988 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Gm6108-201ENSMUST00000208365 367 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.06□□□□□ -0.64
Fv4P11370 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.06□□□□□ -0.64
Fv4P11370 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.06□□□□□ -0.64
Fv4P11370 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.06□□□□□ -0.64
Fv4P11370 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Fv4P11370 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.06□□□□□ -0.64
Fv4P11370 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Fv4P11370 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.05□□□□□ -0.64
Fv4P11370 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Fv4P11370 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Fv4P11370 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.05□□□□□ -0.64
Fv4P11370 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.05□□□□□ -0.64
Fv4P11370 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.05□□□□□ -0.64
Fv4P11370 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.05□□□□□ -0.64
Fv4P11370 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Fv4P11370 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Fv4P11370 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms