Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.84□□□□□ -0.67
ApoeP08226 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
ApoeP08226 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
ApoeP08226 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.84□□□□□ -0.67
ApoeP08226 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.84□□□□□ -0.67
ApoeP08226 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
ApoeP08226 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.84□□□□□ -0.67
ApoeP08226 Gm45784-201ENSMUST00000188360 142 ntBASIC10.84□□□□□ -0.67
ApoeP08226 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
ApoeP08226 Gm6266-201ENSMUST00000203844 806 ntBASIC10.84□□□□□ -0.67
ApoeP08226 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.84□□□□□ -0.67
ApoeP08226 Gm5705-201ENSMUST00000066241 711 ntBASIC10.84□□□□□ -0.67
ApoeP08226 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
ApoeP08226 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.84□□□□□ -0.67
ApoeP08226 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.84□□□□□ -0.67
ApoeP08226 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
ApoeP08226 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ApoeP08226 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ApoeP08226 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
ApoeP08226 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
ApoeP08226 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Gm17150-201ENSMUST00000165577 381 ntBASIC10.83□□□□□ -0.68
ApoeP08226 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.83□□□□□ -0.68
ApoeP08226 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.83□□□□□ -0.68
ApoeP08226 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Rps4l-202ENSMUST00000204242 789 ntBASIC10.83□□□□□ -0.68
ApoeP08226 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.83□□□□□ -0.68
ApoeP08226 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.83□□□□□ -0.68
ApoeP08226 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ApoeP08226 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ApoeP08226 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms