Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
TtrP07309 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Gm2553-201ENSMUST00000215986 605 ntBASIC8.27□□□□□ -1.09
TtrP07309 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Gm18065-201ENSMUST00000221395 526 ntBASIC8.27□□□□□ -1.09
TtrP07309 AC166344.1-202ENSMUST00000224139 234 ntBASIC8.27□□□□□ -1.09
TtrP07309 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
TtrP07309 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
TtrP07309 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Gm9035-201ENSMUST00000218318 1697 ntBASIC8.27□□□□□ -1.09
TtrP07309 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Gm19178-201ENSMUST00000217524 1819 ntBASIC8.26□□□□□ -1.09
TtrP07309 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
TtrP07309 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
TtrP07309 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Gm38089-201ENSMUST00000193585 1514 ntBASIC8.26□□□□□ -1.09
TtrP07309 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
TtrP07309 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Gm12390-201ENSMUST00000117897 397 ntBASIC8.26□□□□□ -1.09
TtrP07309 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 Gm9034-201ENSMUST00000182071 1005 ntBASIC8.26□□□□□ -1.09
TtrP07309 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC8.26□□□□□ -1.09
TtrP07309 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
TtrP07309 Rps4l-202ENSMUST00000204242 789 ntBASIC8.26□□□□□ -1.09
TtrP07309 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 CT010486.3-201ENSMUST00000224555 811 ntBASIC8.26□□□□□ -1.09
TtrP07309 AC154222.2-201ENSMUST00000225848 607 ntBASIC8.26□□□□□ -1.09
TtrP07309 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC8.26□□□□□ -1.09
TtrP07309 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC8.26□□□□□ -1.09
TtrP07309 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC8.26□□□□□ -1.09
TtrP07309 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TtrP07309 Gm5740-201ENSMUST00000211003 1857 ntBASIC8.26□□□□□ -1.09
TtrP07309 Gm4864-201ENSMUST00000219894 1461 ntBASIC8.26□□□□□ -1.09
TtrP07309 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms