Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa4P06798 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa4P06798 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa4P06798 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxa4P06798 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxa4P06798 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.3□□□□□ -0.6
Hoxa4P06798 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.3□□□□□ -0.6
Hoxa4P06798 Gm23694-201ENSMUST00000179335 110 ntBASIC11.3□□□□□ -0.6
Hoxa4P06798 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.3□□□□□ -0.6
Hoxa4P06798 Gm43520-201ENSMUST00000197996 164 ntBASIC11.3□□□□□ -0.6
Hoxa4P06798 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.3□□□□□ -0.6
Hoxa4P06798 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hoxa4P06798 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.3□□□□□ -0.6
Hoxa4P06798 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hoxa4P06798 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hoxa4P06798 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.3□□□□□ -0.6
Hoxa4P06798 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
Hoxa4P06798 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa4P06798 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm14460-201ENSMUST00000121511 639 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm22334-201ENSMUST00000158070 133 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm19246-201ENSMUST00000173599 255 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm10731-201ENSMUST00000181171 448 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Hoxa4P06798 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.29□□□□□ -0.6
Hoxa4P06798 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.29□□□□□ -0.6
Hoxa4P06798 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa4P06798 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa4P06798 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms