Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6F6VAN0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6F6VAN0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6F6VAN0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6F6VAN0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6F6VAN0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.79□□□□□ -0.52
Atf6F6VAN0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.78□□□□□ -0.52
Atf6F6VAN0 Gm5369-201ENSMUST00000217499 588 ntBASIC11.78□□□□□ -0.52
Atf6F6VAN0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.78□□□□□ -0.52
Atf6F6VAN0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.78□□□□□ -0.52
Atf6F6VAN0 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atf6F6VAN0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6F6VAN0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6F6VAN0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Gm7851-201ENSMUST00000117574 323 ntBASIC11.77□□□□□ -0.53
Atf6F6VAN0 Gm14363-201ENSMUST00000122304 409 ntBASIC11.77□□□□□ -0.53
Atf6F6VAN0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.77□□□□□ -0.53
Atf6F6VAN0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.77□□□□□ -0.53
Atf6F6VAN0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.77□□□□□ -0.53
Atf6F6VAN0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.77□□□□□ -0.53
Atf6F6VAN0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.77□□□□□ -0.53
Atf6F6VAN0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.77□□□□□ -0.53
Atf6F6VAN0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.77□□□□□ -0.53
Atf6F6VAN0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms