Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 AC125374.1-201ENSMUST00000213573 1400 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm12338-201ENSMUST00000122170 192 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm5766-202ENSMUST00000161633 799 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm20611-201ENSMUST00000177492 1131 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm29175-201ENSMUST00000189500 402 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm29067-201ENSMUST00000190821 470 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm3527-201ENSMUST00000198905 460 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm45756-201ENSMUST00000212491 407 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm37651-201ENSMUST00000194679 1494 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm25593-201ENSMUST00000102272 96 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm15580-201ENSMUST00000121587 556 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm15383-201ENSMUST00000121889 1443 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm16165-201ENSMUST00000160140 795 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Wdr20rt-203ENSMUST00000221980 1667 ntTSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Hsd17b6-202ENSMUST00000219183 1522 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 AC124561.1-202ENSMUST00000228652 1929 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm16077-201ENSMUST00000121915 655 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm16235-201ENSMUST00000146132 342 ntTSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Rcan2-203ENSMUST00000177857 984 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm25129-201ENSMUST00000082651 133 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 n-R5s5-201ENSMUST00000083134 119 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Defa32-201ENSMUST00000084041 425 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Defa20-201ENSMUST00000084042 425 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm45546-201ENSMUST00000211053 2394 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms