Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H2afb2S4R1M3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm13809-201ENSMUST00000117921 597 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm3150-201ENSMUST00000166418 204 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm5369-201ENSMUST00000217499 588 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
H2afb2S4R1M3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
H2afb2S4R1M3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Btrc-209ENSMUST00000224478 2194 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Gm15236-201ENSMUST00000117309 379 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Gm12217-201ENSMUST00000118858 696 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Gm11941-201ENSMUST00000119904 610 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Mir6927-201ENSMUST00000184494 71 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
H2afb2S4R1M3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
H2afb2S4R1M3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms